Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937185.1_cds_XP_016482525.1_73742
CDS Infomation

[gene=LOC107803342] [db_xref=GeneID:107803342] [protein=TBC1 domain family member 2B-like isoform X2] [protein_id=XP_016482525.1] [location=join(17210..17265,19658..19727,20068..20664,20766..20957,21066..21179,21437..21495,21729..21795,21939..21990,22117..22209,22390..22473,22589..23013,25853..25914,26766..26835,28381..28461,28566..28667,29807..29935)] [gbkey=CDS]
Sequence

ATGAAGGCAGAAACAGCGGTTTTGAATCCACCTCTCATCTCTTTTGACAACAAGAGGGAT
GCTTATGGATTTGCTGTACGGCCTCAGCATGTACAAAGATACCGTGAATATGCTAATATC
TACAAGGAAGAAGAGGAAGAGAGGTCTGAGAGGTGGAACGATTTTTTGGAGCGTCAAGCA
GAGTCTGCTCAGTTACCCATAAATGGGATATCTGCAGACAAAAGTTCTACTAATCCTGGT
GCTGAACCAATTAATCAGGAGGTAAGCTGTGATGCACAGAACGGGGAAGAAGGTCAACTT
GAAAGTGCAACTGAGAAGGATGTCACACTGATCACCTCTGTGGAGAGGAAAATTTGTCAG
GCTCAGATGTGGACGGAAATTAGACCATCTCTACAGGCAGTTGAGGATATGATGAGCACT
CGTGTCAAAAAGAAAGTAAACTTAGCCAAACAGGAGCAAGATTCTGGTCTGAGGAAGCAC
CTTCCTGCAATTGAAGAGTCTAGACCCACAAAAGGAGTATTTGAAGAGGACTCGGAAGAT
GAGTTTTATGATATAGAAAGATCAGAATCTTTGGACAAATCTGAGTTAGATTCGATGCAA
GACATTCCGTTAAATGATACTGCTAGCCATTTGGCTAATACTAGTCAAGAGTCTTTGCCT
CCTTGGAAAGAAGAATTGGAGTGTCTTGTTCAGGGTGGAGTACCCATGGCTCTTAGGGGA
GAGCTTTGGCAAGCCTTTGTGGGTGTGAGGGCACGCAAAGTGGGGACCTATTATCAAGAT
TTGCTTGCATTAGGCACTAGATCTAGTAATAATACGGAGCTTAAAAGTGTGGAATCAGAG
GACCGTGGAAGTTCTGTGGACACGAGCATAGACTGTGTATCTATACCTGAGAAATGGAGA
GGGCAGATCGAGAAGGATCTACCACGAACATTTCCTGGACATCCTGCTCTAGACGAGGAT
GGAAGAAATGCTTTAAGGCGTTTACTTACAGCGTATGCTCGACACAATCCCTCGGTTGGC
TATTGTCAGGCCATGAATTTCTTTGCTGGTCTGTTATTGCTTTTAATGCCAGAGGAAAAT
GCATTTTGGACTTTGATGGGGATCTTAGATGATTACTTTGATGGATACTACGCAGAAGAG
ATGATAGAGTCTCAGGTTGACCAACTTGTTCTTGAGGAGTTGGTGCGAGAGAGATTTCCA
AAGTTGGTTAATCATCTGGATTACCTGGGAGTGCAGGTAGCATGGGTAACAGGACCATGG
TTCCTCTCCATATTTATGAACATGCTTCCATGGGAAAGTGTCCTTAGGGTATGGGATGTG
CTTCTGTTTGAAGGAAATCGAGTGATGTTATTTCGTACAGCTCTTGCTTTGATGGAATTA
TATGGACCTGCATTAGTTACCACAAAAGATGCTGGGGATGCAGTCACCCTGCTGCAGTCG
CTTGCTGGCTCGACATTCGATAGCAGTCAACTTGTTCTGACTGCGTGCATGGGCTATCAA
AATGTCAATGAAGCTAGATTAGAAGTACTAAGAAATAAGCATCGGCCAGCCGTGAAGGCT
GCATTGGAAGAGAGGACTAAAGGGCTCCGAGTTTTGAGGGATTCTCAGGGTCTAGTATCT
AAATTATACAGTTTTAAGCATGATTCTGGATCTGCAATTTTAGGAGTCACTAAAACAGAT
CAAAAGGCTGATGCAGAGACAAATAGTGATGCATCTCAGACGGATATTGCATCTGCTAAT
ATGGATGAACTTTATATGAGCTTGAATGGGAATGTGGAAATAGATTCTGTTCCAGATCTT
CAAGAACAGGTGGTTTGGCTGAAGGTTGAGATGTGCAAGTTGTTGGAGGAGAAACGATCT
GCTGAACTAAGAGCAGAGGAGTTGGAAACAGCACTGATGGAGATGGTCAAGCAGGATAAC
AGGCGGCAGTTGAGCGCAAGGGTTGAGCAATTAGAACAAGAGGTTGTTGAGCTCCGACAG
GCACTTGCTGATAAGCAAGAGCAAGAAAGTGCCATGCTTCAGGTTCTCATGAGGGTGGAG
CAAGAACAGAGGGTAACGGAAGATGCTCGTAGATTCGCTGAACAAGAGGCAGCGGCTCAA
AGATTTGCCTCTCAAATGCTACAGGAGAAGTATGAAGAAGCCACGGGATCCCTCGCTGAG
ATGGAAAAGAGACTTGTTATGGCTGAATCAATGCTGGAGGCTACCTTGCAATACCAGTCC
GGACAAAATAAAGTATTACCTTCTCCAAGGTAG

Peptide Sequence

PEP ID

XP_016482525.1
PEP Infomation

PREDICTED: TBC1 domain family member 2B-like isoform X2 [Nicotiana tabacum]
Sequence

MKAETAVLNPPLISFDNKRDAYGFAVRPQHVQRYREYANIYKEEEEERSERWNDFLERQA
ESAQLPINGISADKSSTNPGAEPINQEVSCDAQNGEEGQLESATEKDVTLITSVERKICQ
AQMWTEIRPSLQAVEDMMSTRVKKKVNLAKQEQDSGLRKHLPAIEESRPTKGVFEEDSED
EFYDIERSESLDKSELDSMQDIPLNDTASHLANTSQESLPPWKEELECLVQGGVPMALRG
ELWQAFVGVRARKVGTYYQDLLALGTRSSNNTELKSVESEDRGSSVDTSIDCVSIPEKWR
GQIEKDLPRTFPGHPALDEDGRNALRRLLTAYARHNPSVGYCQAMNFFAGLLLLLMPEEN
AFWTLMGILDDYFDGYYAEEMIESQVDQLVLEELVRERFPKLVNHLDYLGVQVAWVTGPW
FLSIFMNMLPWESVLRVWDVLLFEGNRVMLFRTALALMELYGPALVTTKDAGDAVTLLQS
LAGSTFDSSQLVLTACMGYQNVNEARLEVLRNKHRPAVKAALEERTKGLRVLRDSQGLVS
KLYSFKHDSGSAILGVTKTDQKADAETNSDASQTDIASANMDELYMSLNGNVEIDSVPDL
QEQVVWLKVEMCKLLEEKRSAELRAEELETALMEMVKQDNRRQLSARVEQLEQEVVELRQ
ALADKQEQESAMLQVLMRVEQEQRVTEDARRFAEQEAAAQRFASQMLQEKYEEATGSLAE
MEKRLVMAESMLEATLQYQSGQNKVLPSPR

Transcript Sequence

Gene sequence data has not been registered.